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staphb/seroba:2.0.6

Machine learning & AI
Data science
Index digest

sha256:8da1a792c153c7b0c6673c35118cb70672547d20d295f1a35e308bc1868b61ed

OS/ARCH

linux/amd64

Compressed size

569.75 MB

Last pushed

7 months by staphbadmin

Type

Image

Manifest digest

sha256:797627c748844ea0ed08f6fe2598a030d965f98076caf4baa7e689e5f590f4c6

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 28.35 MB
6CMD ["/bin/bash"]0 B
7ARG CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt0 B
8ARG MAMBA_USER=mambauser0 B
9ARG MAMBA_USER_ID=574390 B
10ARG MAMBA_USER_GID=574390 B
11ENV MAMBA_USER=mambauser0 B
12ENV MAMBA_USER_ID=574390 B
13ENV MAMBA_USER_GID=574390 B
14ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
15ENV ENV_NAME=base0 B
16ENV MAMBA_ROOT_PREFIX=/opt/conda0 B
17ENV MAMBA_EXE=/bin/micromamba0 B
18ENV CONDA_OVERRIDE_CUDA=0 B
19COPY /bin/micromamba /bin/micromamba # buildkit7.03 MB
20COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit123.59 KB
21COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit552 B
22COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit284 B
23RUN |4 CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt MAMBA_USER=mambauser MAMBA_USER_ID=574393.98 KB
24USER mambauser0 B
25WORKDIR /tmp32 B
26COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit216 B
27COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit704 B
28COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit657 B
29ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B
30CMD ["/bin/bash"]0 B
31COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit348 B
32SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B
33ARG SEROBA_VERSION=2.0.60 B
34ARG PYSAM_VERSION=0.15.00 B
35ARG PYMUMMER_VERSION=0.10.30 B
36ARG PYYAML_VERSION=5.4.10 B
37USER root0 B
38WORKDIR /0 B
39LABEL base.image=mambaorg/micromamba:2.3.1-ubuntu22.040 B
40LABEL dockerfile.version=10 B
41LABEL software=SeroBA0 B
42LABEL software.version=2.0.60 B
43LABEL description=k-mer based Pipeline to0 B
44LABEL website=https://github.com/GlobalPneumoSeq/seroba0 B
45LABEL license=https://github.com/GlobalPneumoSeq/seroba/blob/master/LICENSE0 B
46LABEL maintainer=Kelsey Florek0 B
47LABEL [email protected]0 B
48LABEL maintainer2=Kutluhan Incekara0 B
49LABEL [email protected]0 B
50RUN |4 SEROBA_VERSION=2.0.6 PYSAM_VERSION=0.15.0 PYMUMMER_VERSION=0.10.3496.82 MB
51ENV PATH=/opt/conda/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LC_ALL=C.UTF-80 B
52RUN |4 SEROBA_VERSION=2.0.6 PYSAM_VERSION=0.15.0 PYMUMMER_VERSION=0.10.337.43 MB
53CMD ["seroba" "--help"]0 B
54WORKDIR /data94 B

Command

 ARG RELEASE