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staphb/seqsero2:1.0.0

Manifest digest

sha256:7eebafa22bc7b2962078bf285f0089fca9e2caaeb8e9a80d9a96ca3ff63eb638

OS/ARCH

linux/amd64

Compressed size

286.99 MB

Last pushed

about 7 years by staphb

Type

Image

Manifest digest

sha256:7eebafa22bc7b2962078bf285f0089fca9e2caaeb8e9a80d9a96ca3ff63eb638

Image Layers

Image Layers

1ADD file ... in / 41.89 MB
2/bin/sh -c rm -rf /var/lib/apt/lists/*527 B
3/bin/sh -c set -xe &&847 B
4/bin/sh -c mkdir -p /run/systemd170 B
5CMD ["/bin/bash"]0 B
6LABEL base.image=ubuntu:xenial0 B
7LABEL version=10 B
8LABEL software=SeqSero20 B
9LABEL software.version=1.0.00 B
10LABEL description=Salmonella serotyping from0 B
11LABEL website=https://github.com/denglab/SeqSero20 B
12LABEL license=https://github.com/denglab/SeqSero2/blob/master/LICENSE0 B
13LABEL maintainer1=Jake Garfin0 B
14LABEL [email protected]0 B
15LABEL maintainer2=Curtis Kapsak0 B
16LABEL [email protected]0 B
17/bin/sh -c apt-get update &&181.75 MB
18/bin/sh -c pip3 install 'biopython16.7 MB
19/bin/sh -c wget 'https://github.com/samtools/samtools/releases/download/1.9/samtools-1.9.tar.bz2' &&18.44 MB
20/bin/sh -c wget https://github.com/hcdenbakker/SalmID/archive/0.122.tar.gz &&2.64 MB
21/bin/sh -c wget https://github.com/ablab/spades/releases/download/v3.8.2/SPAdes-3.8.2-Linux.tar.gz &&9.85 MB
22/bin/sh -c wget https://github.com/denglab/SeqSero2/archive/v1.0.0.tar.gz &&15.72 MB
23ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/SeqSero2-1.0.0:/SPAdes-3.8.2-Linux/bin:/SalmID-0.122:/samtools-1.90 B
24WORKDIR /data0 B

Command

ADD file:603693e48cdc7f0c5c62119923aadbb266e5df5a5002fc0f61295858f91690e8 in /