staphb/seqsero2:0.1.0

Manifest digest

sha256:98eaa1c8e99a0316ca6854f73127dd883d1d29c47f82f5d742630cf4f168cccb

OS/ARCH

linux/amd64

Compressed size

321.07 MB

Last pushed

about 7 years by staphb

Type

Image

Manifest digest

sha256:98eaa1c8e99a0316ca6854f73127dd883d1d29c47f82f5d742630cf4f168cccb

Image Layers

1ADD file ... in / 41.89 MB

2/bin/sh -c rm -rf /var/lib/apt/lists/*527 B

3/bin/sh -c set -xe &&847 B

4/bin/sh -c mkdir -p /run/systemd170 B

5CMD ["/bin/bash"]0 B

6LABEL base.image=ubuntu:xenial0 B

7LABEL version=10 B

8LABEL software=SeqSero20 B

9LABEL software.version=0.10 B

10LABEL description=Salmonella serotyping from0 B

11LABEL website=https://github.com/denglab/SeqSero20 B

12LABEL license=https://github.com/denglab/SeqSero2/blob/master/LICENSE0 B

13LABEL maintainer=Jake Garfin0 B

14LABEL [email protected]0 B

15/bin/sh -c apt-get update &&181.7 MB

16/bin/sh -c pip3 install biopython45.95 MB

17/bin/sh -c wget 'https://github.com/samtools/samtools/releases/download/1.9/samtools-1.9.tar.bz2' &&18.44 MB

18/bin/sh -c wget https://github.com/hcdenbakker/SalmID/archive/0.122.tar.gz &&2.64 MB

19/bin/sh -c wget http://cab.spbu.ru/files/release3.13.0/SPAdes-3.13.0-Linux.tar.gz &&14.75 MB

20/bin/sh -c wget https://github.com/denglab/SeqSero2/archive/v0.1.tar.gz &&15.7 MB

21

ENV PATH=/SeqSero2-0.1:/SPAdes-3.13.0-Linux/bin:/SalmID-0.122:/samtools-1.9:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

22WORKDIR /data0 B

Command

ADD file:603693e48cdc7f0c5c62119923aadbb266e5df5a5002fc0f61295858f91690e8 in /