staphb/ppanggolin:2.3.2

Index digest

sha256:12c9d1c97840398df45967600c1fdcff25f8d253bb518d51a2af86d8281423be

OS/ARCH

linux/amd64

Compressed size

475.42 MB

Last pushed

11 days by staphbadmin

Type

Image

Manifest digest

sha256:594fc84390ac8f6777ce8511e97da3455cc8fb58eaa683fbaf5741e4a5bd1f0f

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.version=24.040 B

4ADD file ... in / 28.39 MB

5CMD ["/bin/bash"]0 B

6ARG CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt0 B

7ARG MAMBA_USER=mambauser0 B

8ARG MAMBA_USER_ID=574390 B

9ARG MAMBA_USER_GID=574390 B

10ENV MAMBA_USER=mambauser0 B

11ENV MAMBA_USER_ID=574390 B

12ENV MAMBA_USER_GID=574390 B

13ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

14ENV ENV_NAME=base0 B

15ENV MAMBA_ROOT_PREFIX=/opt/conda0 B

16ENV MAMBA_EXE=/bin/micromamba0 B

17ENV CONDA_OVERRIDE_CUDA=0 B

18COPY /bin/micromamba /bin/micromamba # buildkit7.37 MB

19COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit103.08 KB

20COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit553 B

21COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit285 B

22RUN |4 CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt MAMBA_USER=mambauser MAMBA_USER_ID=574393.98 KB

23USER mambauser0 B

24WORKDIR /tmp32 B

25COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit216 B

26COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit701 B

27COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit656 B

28ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B

29CMD ["/bin/bash"]0 B

30COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit346 B

31SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B

32ARG PPANGGOLIN_VER=2.3.20 B

33LABEL base.image=mambaorg/micromamba:2.9.0-ubuntu24.040 B

34LABEL dockerfile.version=10 B

35LABEL software=PPanGGOLiN0 B

36LABEL software.version=2.3.20 B

37LABEL description=Depicting microbial species diversity0 B

38LABEL website=https://github.com/labgem/PPanGGOLiN0 B

39LABEL license=https://github.com/labgem/PPanGGOLiN/blob/master/LICENSE.txt0 B

40LABEL maintainer=Erin Young0 B

41LABEL [email protected]0 B

42USER root0 B

43RUN |1 PPANGGOLIN_VER=2.3.2 /usr/local/bin/_dockerfile_shell.sh apt-get1.31 MB

44ENV PATH=/opt/conda/envs/base/bin/:/opt/conda/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LC_ALL=C0 B

45RUN |1 PPANGGOLIN_VER=2.3.2 /usr/local/bin/_dockerfile_shell.sh micromamba438.24 MB

46CMD ["/usr/local/bin/_dockerfile_shell.sh" "ppanggolin -h"]0 B

47WORKDIR /data93 B

Command

 ARG RELEASE