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staphb/emm-typing-tool:0.0.1

Machine learning & AI
Data science
Manifest digest

sha256:6ac1133c4198732c4a8020ac2da46db5ea306008a1b10e5cee5e7987b0eddf29

OS/ARCH

linux/amd64

Compressed size

414.05 MB

Last pushed

about 7 years by staphb

Type

Image

Manifest digest

sha256:6ac1133c4198732c4a8020ac2da46db5ea306008a1b10e5cee5e7987b0eddf29

Image Layers

Image Layers

1ADD file ... in / 41.89 MB
2/bin/sh -c rm -rf /var/lib/apt/lists/*527 B
3/bin/sh -c set -xe &&847 B
4/bin/sh -c mkdir -p /run/systemd170 B
5CMD ["/bin/bash"]0 B
6LABEL base.image=ubuntu:xenial0 B
7LABEL version=10 B
8LABEL software=emm-typing-tool0 B
9LABEL software.version=0.0.10 B
10LABEL description=Assign emm type0 B
11LABEL website=https://github.com/phe-bioinformatics/emm-typing-tool0 B
12LABEL license=https://raw.githubusercontent.com/phe-bioinformatics/emm-typing-tool/master/LICENCE0 B
13LABEL maintainer=Jake Garfin0 B
14LABEL [email protected]0 B
15/bin/sh -c apt-get update &&162.32 MB
16/bin/sh -c wget 'https://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-linux-x86_64.zip' &&25.89 MB
17/bin/sh -c wget 'https://downloads.sourceforge.net/project/samtools/samtools/0.1.19/samtools-0.1.19.tar.bz2' &&3.4 MB
18/bin/sh -c wget 'ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz' &&124.8 MB
19/bin/sh -c pip install --upgrade54.41 MB
20/bin/sh -c git clone https://github.com/phe-bioinformatics/emm-typing-tool.git322.5 KB
21/bin/sh -c mkdir /db &&1.02 MB
22ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/samtools-0.1.19:/bowtie2-2.2.9:/EMBOSS-6.6.0/emboss:/emm-typing-tool0 B
23WORKDIR /data0 B

Command

ADD file:603693e48cdc7f0c5c62119923aadbb266e5df5a5002fc0f61295858f91690e8 in /