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chrisamiller/seurat-bm:0.3

Multi-platform
Index digest

sha256:60d4b075b8f0f5da311c4b567899b62b0cfae3480acf2c0ac3883e72468b4709

OS/ARCH

Compressed size

1.22 GB

Last pushed

19 days by chrisamiller

Type

Image

Manifest digest

sha256:c84f1feec30e058e77f1e7bc2dbfb947d0ec102f04999c6d6a313fb42efd1d68

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 28.35 MB
6CMD ["/bin/bash"]0 B
7ENV R_VERSION=4.5.10 B
8ENV R_HOME=/usr/local/lib/R0 B
9ENV TZ=Etc/UTC0 B
10COPY scripts/install_R_source.sh /rocker_scripts/install_R_source.sh # buildkit1.81 KB
11RUN /bin/sh -c /rocker_scripts/install_R_source.sh #292.94 MB
12ENV CRAN=https://p3m.dev/cran/__linux__/noble/2025-10-300 B
13ENV LANG=en_US.UTF-80 B
14COPY scripts/bin/ /rocker_scripts/bin/ # buildkit2.76 KB
15COPY scripts/setup_R.sh /rocker_scripts/setup_R.sh # buildkit1.46 KB
16RUN /bin/sh -c if grep27.17 MB
17CMD ["R"]0 B
18COPY scripts /rocker_scripts # buildkit19.57 KB
19SHELL [/bin/bash -eo pipefail -c]0 B
20LABEL org.opencontainers.image.title=seurat-bm org.opencontainers.image.description=Seurat 5 bone-marrow0 B
21ENV DEBIAN_FRONTEND=noninteractive OMP_NUM_THREADS=10 B
22RUN /bin/bash -eo pipefail -c132.25 MB
23ARG QUARTO_VERSION=1.10.180 B
24ARG TARGETARCH=amd640 B
25RUN |2 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 /bin/bash142.93 MB
26ARG BUILD_JOBS=20 B
27ENV CCACHE_DIR=/ccache CCACHE_MAXSIZE=5G CCACHE_BASEDIR=/tmp CCACHE_NOHASHDIR=10 B
28COPY Makevars.ccache /tmp/Makevars.ccache # buildkit426 B
29COPY pkg_utils.R /tmp/pkg_utils.R # buildkit1.14 KB
30COPY install_cran.R /tmp/install_cran.R # buildkit1.12 KB
31RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=2165.71 MB
32COPY install_bioc.R /tmp/install_bioc.R # buildkit1.99 KB
33RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=2375.32 MB
34COPY install_github.R /tmp/install_github.R # buildkit795 B
35RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=222.42 MB
36ENV EXPERIMENT_HUB_CACHE=/opt/hubcache/ExperimentHub ANNOTATION_HUB_CACHE=/opt/hubcache/AnnotationHub GYPSUM_CACHE_DIR=/opt/hubcache/gypsum R_USER_CACHE_DIR=/opt/rcache0 B
37RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=2197 B
38COPY fetch_references.R /tmp/fetch_references.R # buildkit566 B
39RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=232.16 MB
40RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=232.15 MB
41RUN |3 QUARTO_VERSION=1.10.18 TARGETARCH=amd64 BUILD_JOBS=23.37 KB
42WORKDIR /project97 B
43CMD ["R" "--no-save"]0 B

Command

 ARG RELEASE